CDS

Accession Number TCMCG041C17188
gbkey CDS
Protein Id XP_010263240.1
Location complement(join(1682232..1682306,1682400..1682471,1682575..1682637,1684618..1684723,1684804..1684898,1685012..1685041,1697718..1697789,1699103..1699162,1699238..1699284,1718976..1719040,1719434..1719522,1719606..1719644,1719735..1719794,1728621..1728693,1730386..1730594,1741727..1741807,1751297..1751428,1751537..1751637,1757325..1757448,1768196..1768340,1771668..1771854,1778286..1778374,1780550..1780685,1782386..1782493,1789374..1789401))
Gene LOC104601562
GeneID 104601562
Organism Nelumbo nucifera

Protein

Length 761aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264089
db_source XM_010264938.2
Definition PREDICTED: U3 small nucleolar RNA-associated protein 25 isoform X1 [Nelumbo nucifera]

EGGNOG-MAPPER Annotation

COG_category L
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAACGATACGGCAGAAAAAGAGGGCATATGAGACCTAAGACACCTGAGAAAACTAACACAAGCAAGGATATGAGGAAGAATCAGCGTATTGAAAATAATGTTGCTCATAGCTCATCACCAAGTTCCTCAGGAAATTCCTCCGAGGATCATTGGAAGAGCACAACATCTGAAAGCGTATTAGTTTATAAGGAACCTTCAGTGTATGATAACTTATTAATGACGTTGGGGTCGGGAAGTGAATCTCTTGCCAATGTGTATAAGAGGAGAAAAAAAGAAGAAGAAGGTAGAAGTGATACCGAGGAAGATGAAGATTATGCTTTTGAAATGTCTGGCGGGTCTGAAGAAGAGAATAATGGGTCTGATGATGACTCTGGTCAAAGTCATGCCATGCAAACTGAGATACAGGAATCTATAAATATTGACCCTATTGAGCAGAGTGAAGAAGATGAAACAGTAGATGAGGATGAAGCCTCTGATTCTGATGAAGAGCACGAATTGGAGCTCAATGGTCAAACTGGTACTGATGTAACAAAAAGCATGAGCTCATTTAATCTTCACTTGGGGAACAAACTATCAAATTTAGAGGTTGTTGCATTGACAAAAAATAAGTGGAAATTTGAATGGGAGGTACCTGCCGTTGGCATGTTGATGTCAAAATGGGTAGGGACAGGAAAATGTTTCCTAAAGGAAGATAATGACAATTGTGTTAGTGGATTGAAGCAGAAGTTGTATAAGCATTGGTTGAATGTTTATAAAATGTCCGGAGGCATTAATTTCAATTCATCCAAGCAAAAACTATTCTTCTCAATTTGCAACAGCTATCGTGATATATTACACTGTAACAAGAAGCCCTTTTATCTCAAAGGCCTGGAAGAAGATTCAAGTATCATGGATGCATATATTATGCATGCTCTGAACCACATCTTTAGAACTAGAGATATTGTGGTAAAAAATGATGCAAAATTATCCAAGAATCAAGATGCTGTCAAGGAAGAAATTCTTAGTGGTGATAGATTTCTTGATCATGGGTTTACTCGTCCTAAGGTTCTTATCCTATTACCACTTGCAAGTGTTGCATACCGTGTCGTTAGGAGGTTAATACAACTGACCCCTTCATCAAATAAAGTCAATGTGGAGTATAGTGATCGTTTCTCTGATGAATTTGGTGCCGAAGCAGTACAGGATGATAATGATGATGGCGAAAATGAGATAGCAAACAATGTTCGAGATAATGAAAACTCAAACATACAGAAGTCTTCTAAACCTTCAGATTTTCAAGTCCTTTTTGGTGGGAACAACAATGACCACTTTATGATGGGTATCAAGTTTACTAGGAAAAGTATAAAGATGTATAGTGACTTTTATTCCTCAGACATGATTATTGCTTCTCCTCTTGGACTAATTACTAAAATTGGGGAAGCTGAGGTTGAGAAGGAAAAGGATGTTGATTATCTGTCTTCCATAGAGGTACTGATAATTGATCATGCGGATGTAATAGCAATGCAGAATTGGTCTCATGTAAATTCTGTGGTTGAACAACTGAACTGCTTTCCATCAAAGCAGCATGGAATTGATGTCATGCGCATTAGACATTGGTATCTTGATGGACACTCACGGTTCTATAGACAAACCATTGTTTTAGGGTCATTTGTAAATCCAGACCTAAATGCACTTTTCAATCGCCTTTGTGTAAATTATGAAGGAAAGGTGAAGTTGATCTCTGAGTATAAAGGTGTTCTTCCGAAAGTGTTGCTTCAAGTGCGGCAGATTTATGAGCGTTTTGATGCAAGTTCAATCATTAATGCTGATGATTCTCGGCTAGATTATTTTTCTAAAAAGGTGTTCCCTAAAATAAAGGATTCAGTTCAGGGTGGAATTATGATTTTTATCAGTTCGTACTTCGAGTTTGTTCGAATTAGGAATTTCTTGAAATTGCAAAATGCATCCTTTTGTTTGCTTGACGAGTACACAAAGCAGAGTGATATATCTCGTGCACGGGGTTGGTTTTTTCAAGGAACAAGGAAGATCATGCTCTATACTGAGAGAGCACACTTCTATCACAGATACAAGATTCGTGGCATACAGAATTTAATTATATACTCTCTTCCAGAAAGGAAAGAATTTTATCCAGAGATTGTTAATATGCTTGAAGGATCGGATAATATGGCTTGCACTGCACTGTTCTCTCGCTTCGATCAGTATAGGCTTGAGAGAATTGTTGGAACCGCTTCTTCAAAAAAAATGGTGTCATCTGAGAAGAACGTTTTCCTTTTCTGTTAG
Protein:  
MGKRYGRKRGHMRPKTPEKTNTSKDMRKNQRIENNVAHSSSPSSSGNSSEDHWKSTTSESVLVYKEPSVYDNLLMTLGSGSESLANVYKRRKKEEEGRSDTEEDEDYAFEMSGGSEEENNGSDDDSGQSHAMQTEIQESINIDPIEQSEEDETVDEDEASDSDEEHELELNGQTGTDVTKSMSSFNLHLGNKLSNLEVVALTKNKWKFEWEVPAVGMLMSKWVGTGKCFLKEDNDNCVSGLKQKLYKHWLNVYKMSGGINFNSSKQKLFFSICNSYRDILHCNKKPFYLKGLEEDSSIMDAYIMHALNHIFRTRDIVVKNDAKLSKNQDAVKEEILSGDRFLDHGFTRPKVLILLPLASVAYRVVRRLIQLTPSSNKVNVEYSDRFSDEFGAEAVQDDNDDGENEIANNVRDNENSNIQKSSKPSDFQVLFGGNNNDHFMMGIKFTRKSIKMYSDFYSSDMIIASPLGLITKIGEAEVEKEKDVDYLSSIEVLIIDHADVIAMQNWSHVNSVVEQLNCFPSKQHGIDVMRIRHWYLDGHSRFYRQTIVLGSFVNPDLNALFNRLCVNYEGKVKLISEYKGVLPKVLLQVRQIYERFDASSIINADDSRLDYFSKKVFPKIKDSVQGGIMIFISSYFEFVRIRNFLKLQNASFCLLDEYTKQSDISRARGWFFQGTRKIMLYTERAHFYHRYKIRGIQNLIIYSLPERKEFYPEIVNMLEGSDNMACTALFSRFDQYRLERIVGTASSKKMVSSEKNVFLFC